2024-Aug-11 21:22:42 /g1/programs/pete/SRC2/src/is/gebvtest_2024A.py: start

Options:  --outdir G --target=EBV --baseadj=NONE -m --min_byear=2007 HOL ABC .

Processing brd=HOL pop=ABC cou=ABC datadir=.

Summary statistics on candidate bulls (CB) and test bulls (TB)
--------------------------------------------------------------
Trait Variable         N      Mean       Std      Min      Max
--------------------------------------------------------------
mil   CB EBV          35   903.543  1020.707 -1687.00  2962.00
mil   TB EBV          28   805.250  1080.555 -1687.00  2962.00
mil   TB  VAL(y)      28   805.250  1080.555 -1687.00  2962.00
mil   TB GEBV(x1)     28  1238.429   768.863  -726.00  2624.00
mil   TB EBVr(x2)     28  1423.786   687.807  -265.00  2342.00

After Base adjustments:
mil p=0.957 x=-1.712 i=0.096 k=0.174 R2b=0.778 E(b1)=0.955 b1=1.203
mil b1-E(b1) =  0.248  t =  1.55  bootstrap P(b=Eb) = 11.6  b1_test = NS+
mil R2_1 = 74.3  R2_2 = 68.3   bootstrap P(R2_gain) = 75.6  R2_test = NS+
mil   stat_test=Y   pract_test=N   bio_test=N   R2_test=-   overall = hiSE


Summary statistics on candidate bulls (CB) and test bulls (TB)
--------------------------------------------------------------
Trait Variable         N      Mean       Std      Min      Max
--------------------------------------------------------------
fat   CB EBV          34    35.471    37.778   -65.00    95.00
fat   TB EBV          28    32.071    38.837   -65.00    95.00
fat   TB  VAL(y)      28    32.071    38.837   -65.00    95.00
fat   TB GEBV(x1)     28    48.214    24.151   -19.00    80.00
fat   TB EBVr(x2)     28    50.857    23.818    -4.00    88.00

After Base adjustments:
fat p=0.960 x=-1.749 i=0.090 k=0.165 R2b=0.686 E(b1)=0.941 b1=1.284
fat b1-E(b1) =  0.343  t =  1.73  bootstrap P(b=Eb) =  7.0  b1_test = NS+
fat R2_1 = 64.6  R2_2 = 64.9   bootstrap P(R2_gain) = 47.2  R2_test = NS-
fat   stat_test=Y   pract_test=N   bio_test=N   R2_test=-   overall = hiSE


Summary statistics on candidate bulls (CB) and test bulls (TB)
--------------------------------------------------------------
Trait Variable         N      Mean       Std      Min      Max
--------------------------------------------------------------
pro   CB EBV          34    31.206    28.671   -50.00    89.00
pro   TB EBV          28    27.357    29.966   -50.00    89.00
pro   TB  VAL(y)      28    27.357    29.966   -50.00    89.00
pro   TB GEBV(x1)     28    41.107    19.928   -10.00    72.00
pro   TB EBVr(x2)     28    45.679    19.345     1.00    69.00

After Base adjustments:
pro p=0.936 x=-1.520 i=0.134 k=0.222 R2b=0.733 E(b1)=0.929 b1=1.234
pro b1-E(b1) =  0.304  t =  1.53  bootstrap P(b=Eb) = 11.4  b1_test = NS+
pro R2_1 = 68.1  R2_2 = 51.1   bootstrap P(R2_gain) = 97.8  R2_test = Pass
pro   stat_test=Y   pract_test=N   bio_test=N   R2_test=Y   overall = hiSE


Summary statistics on candidate bulls (CB) and test bulls (TB)
--------------------------------------------------------------
Trait Variable         N      Mean       Std      Min      Max
--------------------------------------------------------------
scs   CB EBV          31     2.977     0.153     2.71     3.33
scs   TB EBV          27     2.960     0.146     2.71     3.29
scs   TB  VAL(y)      27     2.960     0.146     2.71     3.29
scs   TB GEBV(x1)     27     2.947     0.141     2.65     3.21
scs   TB EBVr(x2)     27     2.934     0.115     2.70     3.13

After Base adjustments:
scs p=0.948 x=-1.626 i=0.112 k=0.195 R2b=0.326 E(b1)=0.860 b1=0.539
scs b1-E(b1) = -0.321  t = -2.02  bootstrap P(b=Eb) =  5.2  b1_test = NS-
scs R2_1 = 28.0  R2_2 = 21.4   bootstrap P(R2_gain) = 68.6  R2_test = NS+
scs   stat_test=Y   pract_test=N   bio_test=N   R2_test=-   overall = hiSE

2024-Aug-11 21:22:44 /g1/programs/pete/SRC2/src/is/gebvtest_2024A.py: end
