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| == Accepted Platform-Array Combinations == '''Please note''' that the Name/Number of SNPs column is not to be used in !GenoEx files. It only gives here additional information for proper identifications of the chips used. ||<tablewidth="624px" tableheight="123px">'''Name / Number of SNPs <<BR>>''' ||'''Platform<<BR>>''' ||'''Array<<BR>>''' || |
= List of genotyping Chips, Platforms and Arrays = The list above shows all genotyping chips currently accepted by GenoEx-PSE and GenoEx-GDE services. Please use a platform/array combination for PSE and array for GDE, according to the specific manuals, available on genoex.org '''Please note''' that the Name of Genotyping Chip column is not to be used in !GenoEx files. It only gives here additional information for proper identifications of the chips used. ||<tablewidth="624px" tableheight="123px">'''Name of Genotyping Chip <<BR>>''' ||'''Platform<<BR>>''' ||'''Array<<BR>>''' || |
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| ||Illumina BovineSNP50v3 !BeadChip ||Illumina ||53218 || | |
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| ||EuroG 10K ||Eurogenomics ||9072 || | ||EuroG 10K v1 ||Eurogenomics ||9072 || ||EuroG 10K v2 ||Eurogenomics ||9001 || ||EuroG 10K v3 ||Eurogenomics ||9983 || ||EuroG 10K v4 ||Eurogenomics ||9925 || ||EuroG 10K v5 ||Eurogenomics ||11497 || ||EuroG 10K v6 ||Eurogenomics ||11009 || |
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| ||EuroG 10K v8 ||Eurogenomics ||10979 || ||EuroG MD ||Eurogenomics ||44870 || |
List of genotyping Chips, Platforms and Arrays
The list above shows all genotyping chips currently accepted by GenoEx-PSE and GenoEx-GDE services.
Please use a platform/array combination for PSE and array for GDE, according to the specific manuals, available on genoex.org
Please note that the Name of Genotyping Chip column is not to be used in GenoEx files. It only gives here additional information for proper identifications of the chips used.
Name of Genotyping Chip |
Platform |
Array |
Affymetrix Axiom Bovine 15K |
Affymetrix |
15036 |
GeneChip Bovine Genome |
Affymetrix |
24072 |
Affymetrix Axiom Bovine 25K |
Affymetrix |
25068 |
Affymetrix Axiom Bovine 50K |
Affymetrix |
51987 |
Affymetrix Axiom Bovine |
Affymetrix |
648875 |
Illumina Bovine3k BeadChip |
Illumina |
2900 |
Illumina BovineLD BeadChip |
Illumina |
6909 |
Illumina BovineLD v1.1 BeadChip |
Illumina |
6912 |
Illumina BovineLD v.2 BeadChip |
Illumina |
7931 |
Illumina Bovine 9K |
Illumina |
8762 |
Illumina Bovine |
Illumina |
53218 |
Illumina BovineSNP50v1 BeadChip |
Illumina |
54001 |
Illumina BovineSNP50v2 BeadChip |
Illumina |
54609 |
Illumina BovineSNP50v3 BeadChip |
Illumina |
53218 |
Illumina BovineHD BeadChip |
Illumina |
777962 |
Illumina 800K BovineHD beadChip |
Illumina |
786799 |
EuroG 10K v1 |
Eurogenomics |
9072 |
EuroG 10K v2 |
Eurogenomics |
9001 |
EuroG 10K v3 |
Eurogenomics |
9983 |
EuroG 10K v4 |
Eurogenomics |
9925 |
EuroG 10K v5 |
Eurogenomics |
11497 |
EuroG 10K v6 |
Eurogenomics |
11009 |
EuroG 10K v7 |
Eurogenomics |
10706 |
EuroG 10K v8 |
Eurogenomics |
10979 |
EuroG MD |
Eurogenomics |
44870 |
GeneSeek Dairy Ultra LD v2 |
GeneSeek |
7049 |
GeenSeek Genomic Profiler LD v1 |
GeneSeek |
8610 |
GeneSeek Genomic Profiler |
GeneSeek |
18819 |
GeneSeek Genomic Profiler |
GeneSeek |
19725 |
GeneSeek Genomic Profiler LD v3 |
GeneSeek |
26151 |
GeneSeek Genomic Profiler v4 |
GeneSeek |
30105 |
GeneSeek Genomic Profiler indicus |
GeneSeek |
35090 |
GeneSeek Genomic Profiler 50K |
GeneSeek |
47843 |
GeneSeek Genomic Profiler HD v1 |
GeneSeek |
76999 |
GeneSeek Genomic Profiler 80K |
GeneSeek |
77376 |
GeneSeek Genomic Profiler HD v2 |
GeneSeek |
139480 |
ICBF International Dairy and Beef |
ICBF custom |
16327 |
ICBF International Dairy and Beef |
ICBF custom |
16499 |
ICBF International Dairy and Beef v3 |
ICBF custom |
52690 |
ICBF International Dairy and Beef |
ICBF custom |
53262 |
ICBF International Dairy and Beef |
ICBF custom |
217807 |
DEA custom chip |
DEA custom |
43376 |
Weatherbys Versa 50K |
Weatherbys |
49629 |