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| Deletions are marked like this. | Additions are marked like this. |
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| ||<tablewidth="624px" tableheight="123px">'''Name Number of SNPs <<BR>>''' ||'''Platform<<BR>>''' ||'''Array<<BR>>''' || | '''Please note''' that the Name/Number of SNPs column is not to be used in !GenoEx files. It only gives here additional information for proper identifications of the chips used. ||<tablewidth="624px" tableheight="123px">'''Name / Number of SNPs <<BR>>''' ||'''Platform<<BR>>''' ||'''Array<<BR>>''' || |
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| ||GeneChip Bovine Genome ||Affymetrix ||24072 || | ||!GeneChip Bovine Genome ||Affymetrix ||24072 || |
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| ||Illumina Bovine3k BeadChip ||Illumina ||2900 || ||Illumina BovineLD BeadChip ||Illumina ||6909 || ||Illumina BovineLD v1.1 BeadChip ||Illumina ||6912 || ||Illumina BovineLD v.2 BeadChip ||Illumina ||7931 || |
||Illumina Bovine3k !BeadChip ||Illumina ||2900 || ||Illumina BovineLD !BeadChip ||Illumina ||6909 || ||Illumina BovineLD v1.1 !BeadChip ||Illumina ||6912 || ||Illumina BovineLD v.2 !BeadChip ||Illumina ||7931 || |
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| ||Illumina BovineSNP50v1 BeadChip ||Illumina ||54001 || ||Illumina BovineSNP50v2 BeadChip ||Illumina ||54609 || ||Illumina BovineHD BeadChip ||Illumina ||777962 || |
||Illumina BovineSNP50v1 !BeadChip ||Illumina ||54001 || ||Illumina BovineSNP50v2 !BeadChip ||Illumina ||54609 || ||Illumina BovineSNP50v3 !BeadChip ||Illumina ||53218 || ||Illumina BovineHD !BeadChip ||Illumina ||777962 || |
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| ||GeneSeek Dairy Ultra LD v2 ||GeneSeek ||7049 || ||GeenSeek Genomic Profiler LD v1 ||GeneSeek ||8610 || ||GeneSeek Genomic Profiler ||GeneSeek ||18819 || ||GeneSeek Genomic Profiler ||GeneSeek ||19725 || ||GeneSeek Genomic Profiler LD v3 ||GeneSeek ||26151 || ||GeneSeek Genomic Profiler v4 ||GeneSeek ||30105 || ||GeneSeek Genomic Profiler 50K ||GeneSeek ||47843 || ||GeneSeek Genomic Profiler HD v1 ||GeneSeek ||76999 || ||GeneSeek Genomic Profiler 80K||GeneSeek||77376|| ||GeneSeek Genomic Profiler HD v2 ||GeneSeek ||139480 || |
||EuroG 10K v1 ||Eurogenomics ||9072 || ||EuroG 10K v2||Eurogenomics||9001|| ||EuroG 10K v3||Eurogenomics||9983|| ||EuroG 10K v4 ||Eurogenomics ||9925 || ||EuroG 10K v5||Eurogenomics||11497|| ||EuroG 10K v6||Eurogenomics||11009|| ||EuroG 10K v7||Eurogenomics||10706|| ||EuroG 10K v8 ||Eurogenomics ||10979 || ||EuroG MD ||Eurogenomics ||44870 || ||!GeneSeek Dairy Ultra LD v2 ||!GeneSeek ||7049 || ||!GeenSeek Genomic Profiler LD v1 ||!GeneSeek ||8610 || ||!GeneSeek Genomic Profiler ||!GeneSeek ||18819 || ||!GeneSeek Genomic Profiler ||!GeneSeek ||19725 || ||!GeneSeek Genomic Profiler LD v3 ||!GeneSeek ||26151 || ||!GeneSeek Genomic Profiler v4 ||!GeneSeek ||30105 || ||!GeneSeek Genomic Profiler indicus ||!GeneSeek ||35090 || ||!GeneSeek Genomic Profiler 50K ||!GeneSeek ||47843 || ||!GeneSeek Genomic Profiler HD v1 ||!GeneSeek ||76999 || ||!GeneSeek Genomic Profiler 80K ||!GeneSeek ||77376 || ||!GeneSeek Genomic Profiler HD v2 ||!GeneSeek ||139480 || |
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Accepted Platform-Array Combinations
Please note that the Name/Number of SNPs column is not to be used in GenoEx files. It only gives here additional information for proper identifications of the chips used.
Name / Number of SNPs |
Platform |
Array |
Affymetrix Axiom Bovine 15K |
Affymetrix |
15036 |
GeneChip Bovine Genome |
Affymetrix |
24072 |
Affymetrix Axiom Bovine 25K |
Affymetrix |
25068 |
Affymetrix Axiom Bovine 50K |
Affymetrix |
51987 |
Affymetrix Axiom Bovine |
Affymetrix |
648875 |
Illumina Bovine3k BeadChip |
Illumina |
2900 |
Illumina BovineLD BeadChip |
Illumina |
6909 |
Illumina BovineLD v1.1 BeadChip |
Illumina |
6912 |
Illumina BovineLD v.2 BeadChip |
Illumina |
7931 |
Illumina Bovine 9K |
Illumina |
8762 |
Illumina Bovine |
Illumina |
53218 |
Illumina BovineSNP50v1 BeadChip |
Illumina |
54001 |
Illumina BovineSNP50v2 BeadChip |
Illumina |
54609 |
Illumina BovineSNP50v3 BeadChip |
Illumina |
53218 |
Illumina BovineHD BeadChip |
Illumina |
777962 |
Illumina 800K BovineHD beadChip |
Illumina |
786799 |
EuroG 10K v1 |
Eurogenomics |
9072 |
EuroG 10K v2 |
Eurogenomics |
9001 |
EuroG 10K v3 |
Eurogenomics |
9983 |
EuroG 10K v4 |
Eurogenomics |
9925 |
EuroG 10K v5 |
Eurogenomics |
11497 |
EuroG 10K v6 |
Eurogenomics |
11009 |
EuroG 10K v7 |
Eurogenomics |
10706 |
EuroG 10K v8 |
Eurogenomics |
10979 |
EuroG MD |
Eurogenomics |
44870 |
GeneSeek Dairy Ultra LD v2 |
GeneSeek |
7049 |
GeenSeek Genomic Profiler LD v1 |
GeneSeek |
8610 |
GeneSeek Genomic Profiler |
GeneSeek |
18819 |
GeneSeek Genomic Profiler |
GeneSeek |
19725 |
GeneSeek Genomic Profiler LD v3 |
GeneSeek |
26151 |
GeneSeek Genomic Profiler v4 |
GeneSeek |
30105 |
GeneSeek Genomic Profiler indicus |
GeneSeek |
35090 |
GeneSeek Genomic Profiler 50K |
GeneSeek |
47843 |
GeneSeek Genomic Profiler HD v1 |
GeneSeek |
76999 |
GeneSeek Genomic Profiler 80K |
GeneSeek |
77376 |
GeneSeek Genomic Profiler HD v2 |
GeneSeek |
139480 |
ICBF International Dairy and Beef |
ICBF custom |
16327 |
ICBF International Dairy and Beef |
ICBF custom |
16499 |
ICBF International Dairy and Beef v3 |
ICBF custom |
52690 |
ICBF International Dairy and Beef |
ICBF custom |
53262 |
ICBF International Dairy and Beef |
ICBF custom |
217807 |
DEA custom chip |
DEA custom |
43376 |
Weatherbys Versa 50K |
Weatherbys |
49629 |